July 2011 Newsletter

Sequence Services Moves to Phase 2

Simon Thornber at Pistoia ConferencePhase 1 of the sequence services project successfully wrapped up in April at our inaugural conference, where four vendors demonstrated proof-of-concept systems providing cloud access to public and proprietary gene sequences.

Now sequence services moves on to Phase 2, which will apply the concepts developed in Phase 1 to next-generation sequencing data. Kudos to Giles Ratcliffe, a seasoned informatics professional most recently with Pfizer, who has helped develop the specifications for Phase 2. Phase 2 will provide a platform for end-to-end sequence analysis that will include public reference sequence data and a suite of core applications.

A detailed requirements specification for Phase 2 has been developed and will be discussed in an open teleconference and WebEx on 22 July 2011.

Learn more about the Phase 2 teleconference »

Download the Phase 2 RFP »

Learn more about the Phase 1 proofs of concept »

Read about Phase 2 project analyst Giles Ratcliffe »

Over 100 Attend First Pistoia Conference

panel_PistoiaWe were overwhelmed by the interest in the first Pistoia Alliance Conference, held in Boston just before BioITWorld on April 12, 2011. Our hosts, Thomson Reuters, did all they could to accommodate everyone who wanted to attend, and we're sorry that we still had to turn people away. Still, the energy in the room was palpable and attendees praised the meeting's focus and opportunity to network with like-minded peers. Plans are already in place to hold the conference again next year.

Review conference highlights »

Download presentations from the conference »

Read official conference report (Members Only) »

Updates from the Working Groups

Technical Committee Discusses Open Query Services

 

Representatives from 20 member and non-member organizations attended a public webinar on RDF and OData sponsored by the Pistoia Alliance Technical Committee. Our thanks to our guest speakers Bob Stanley, CEO of IO Informatics, Eric Prud'hommeaux of the W3C HCLSIG, and Pablo Castro of Microsoft (who discussed OData). If you missed the webinar, the speakers' presentations are available for download, as is a full recording with audio.

Download speaker presentations »

Watch webinar recording »


Growing the Pistoia Alliance Portfolio

The Pistoia Alliance is building the next phase of its project portfolio, and we'd like your input to assess the level of interest in potential future projects in the chemistry and life sciences domains.  A survey was sent last month to all members of our mailing list.  Please complete it and let us know how you want to be involved in Pistoia Alliance projects.

Download the survey as a Word doc »


Out and About

Pistoia Alliance Annual General Meeting »

12 September 2011, 16:00-18:00 BST (11:00 EST) VIA Teleconference

The second annual meeting of Pistoia Alliance members will include updates on Pistoia Alliance projects. Members will also elect new operational team officers and board members. If you wish to stand for election, please email Nick Lynch, Pistoia Alliance President.

Learn more »
Register for the AGM »

 

Bio-ITWorld Conference and Expo Europe »

11-13 October 2011, Hannover, Germany

The Pistoia Alliance is considering holding a workshop in conjunction with this conference to explore project ideas around the information ecosystem concept. To learn more about this concept, complete our project portfolio survey. If you'd be interested in participating in this workshop, register, based on response, we'll decide how to go forward with this event.

 

Next Generation Sequencing Congress »

14-15 November 2011, London, UK

Simon Thornber, chair of the sequence services working group, is speaking at this conference.

On the Blog

Covering Your SaaS »

In this two part series, Pistoia Alliance Technical Committee Chair Pierre Menard shares information on how cloud vendors are using technology to reassure customers that their data will be safe, and also discusses common (mis?)conceptions about the security of data in the cloud.

 

What's Strangling Pharma Innovation? »

Nick Lynch got a rather lively discussion going about what exactly is keeping pharma from being all it can be. Is it bureaucracy? Lack of technology?  Something else entirely? Read some of the provocative comments Nick received.

 

More blog posts »

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