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Ontologies

Toolkit

Delivering Data Driven Value

IDMP Viewer

Ontoviewer to browse the ontology

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Journal Article

Delivering Data Driven Value

Results of the Ontology Alignment Evaluation Initiative 2021

The Ontology Alignment Evaluation Initiative (OAEI) aims at comparing ontology matching systems on precisely defined test cases.

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Toolkit

Delivering Data Driven Value

Ontologies Mapping Resources

This area contains public resources for ontology consumers and providers to support practical application and mapping.

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Journal Article

Delivering Data Driven Value

Results of the Ontology Alignment Evaluation Initiative 2020

This paper presents an overview of the OAEI 2020 campaign, which evaluated 19 ontology matching systems across 36 test cases in 12 tracks using various evaluation methods.

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Project Deliverables

Delivering Data Driven Value

Ontology Matching for the Laboratory Analytics Domain

This paper focuses on the laboratory analytics domain of the Pistoia Alliance Ontologies Mapping Project, introducing the Paxo system and comparing its results to those from the Ontology Alignment Evaluation Initiative.

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Toolkit

Delivering Data Driven Value

The FAIR Toolkit

Supports the implementation of the Findable, Accessible, Interoperable and Re-usable (FAIR) guiding principles

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Journal Article

Delivering Data Driven Value

Results of the ontology alignment evaluation initiative 2019

The Ontology Alignment Evaluation Initiative (OAEI) 2019 compared ontology matching systems across 11 tracks and 29 test cases of varying complexity and evaluation methods, with participation from 20 teams.

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Journal Article

Delivering Data Driven Value

Ontology Mapping for Semantically Enabled Applications

In this review, we provide a summary of recent progress in ontology mapping (OM) at a crucial time when biomedical research is under a deluge of an increasing amount and variety of data.

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Journal Article

Delivering Data Driven Value

Results of the Ontology Alignment Evaluation Initiative 2018

The OAEI 2018 report presents a comprehensive evaluation of ontology matching systems across 12 diverse tracks, providing standardized benchmarks to assess and improve alignment performance using platforms like SEALS and HOBBIT.

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Webinar

Delivering Data Driven Value

Ontologies Mapping for More Effective Data Integration and Knowledge Management

A Pistoia Alliance Debates webinar

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Best Practices Guides

Delivering Data Driven Value

Ontologies Guidelines for Best Practice and a Process to Evaluate Existing Ontologies Mapping Tools and Algorithms

This extended abstract presents an ongoing work by the Pistoia Alliance Ontologies Mapping project to develop user requirements for an ontologies mapping service.

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Project Deliverables

Delivering Data Driven Value

Introducing the Disease and Phenotype OAEI Track

The paper introduces a new evaluation track aimed at aligning medical ontologies related to diseases and phenotypes, to support automated mapping and improve interoperability in biomedical research.

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